PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG004620.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 262aa    MW: 28177.1 Da    PI: 8.9387
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG004620.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA52.66.3e-17153189135
              GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C+nCgt++  Tp +Rrgp g++tLCnaCGl+++ kg+
  TRIDC4BG004620.4 153 CQNCGTSEkmTPAMRRGPAGPRTLCNACGLMWANKGT 189
                       **********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
SPAAPEPVSA FPGNPNQLTL LFQGEVYVFE SVTPDKVQAV LLLLGTGEIP PGLSAMVLPS  60
QRENRGYEDL LQRTDIPAKR VASLIRFREK RKGRNFDKQI RYAVRKEVAH RMQRRKGQFV  120
GRANLEGESP SPGCDPVSQG SGQDFLSRES KLCQNCGTSE KMTPAMRRGP AGPRTLCNAC  180
GLMWANKGTL RSCSKAKVEA PMLAIEQCNT AVAQCQTGTD VKALPAPNNY DVAPSNGEAM  240
DNSVTANATA AAMEGAPKAQ SE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.21e-68GATA family protein