PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG004620.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 224aa    MW: 24875.8 Da    PI: 9.8615
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG004620.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA52.94.9e-17146182135
              GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C+nCgt++  Tp +Rrgp g++tLCnaCGl+++ kg+
  TRIDC4BG004620.5 146 CQNCGTSEkmTPAMRRGPAGPRTLCNACGLMWANKGT 182
                       **********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
VSAFPGNPNQ LTLLFQGEVY VFESVTPDKV QAVLLLLGTG EIPPGLSAMV LPSQRENRGY  60
EDLLQRTDIP AKRVASLIRF REKRKGRNFD KQIRYAVRKE VAHRMQRRKG QFVGRANLEG  120
ESPSPGCDPV SQGSGQDFLS RESKLCQNCG TSEKMTPAMR RGPAGPRTLC NACGLMWANK  180
GTLRSCSKAK VEAPMLAIEQ VRFFIITIDH PLGDRCFLCI PNEP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.23e-68GATA family protein