PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG004620.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 250aa    MW: 27278.3 Da    PI: 4.2964
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG004620.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA49.27.3e-16213249135
              GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C+nCgt++  Tp +Rrgp g++tLCnaCGl+++ kg+
  TRIDC4BG004620.6 213 CQNCGTSEkmTPAMRRGPAGPRTLCNACGLMWANKGT 249
                       *********************************9996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
APPPPAMSDP ASAQGPDAEM RDAAAAAGDE DDAEEEEEED DELEEEEEEE EEELPPAEEP  60
PSPAAPEPVS AFPGNPNQLT LLFQGEVYVF ESVTPDKVQA VLLLLGTGEI PPGLSAMVLP  120
SQRENRGYED LLQRTDIPAK RVASLIRFRE KRKGRNFDKQ IRYAVRKEVA HRMQRRKGQF  180
VGRANLEGES PSPGCDPVSQ GSGQDFLSRE SKCQNCGTSE KMTPAMRRGP AGPRTLCNAC  240
GLMWANKGTC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.29e-65GATA family protein