PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG004770.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 564aa MW: 61226.2 Da PI: 6.081

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG004770.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50.9	3e-16	465	503	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+C+CkkskClk+YCeCfaag++Cse C+C++C Nk TRIDC4BG004770.2 465 SCKRCSCKKSKCLKLYCECFAAGVYCSEPCSCQGCLNKP 503 689**********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 564 aa Download sequence
ARAEDSPLFG FIDSLSPIEP LKSAYSGNGL QAYHQSLNAA SVSSIFTSPH HNAHKEGSKL 60 SKSSFGDYTE NEISMEDGTD KNKSPTSSTA VRLFACTSTI TRESHTMITC SVNEGIVDPP 120 KEPNDLPQPG RFDSGSPDHN TAPCHGVSVR SDLKQDKCPK LEAVQATNNT VEKRKCLFSS 180 DMQPQDGCQP AKENNEVMGC EWEDLVSVTS GELLAFDSSM DQHHTGVQLA VNNAESCGYL 240 LSKLAGGADI PDRTHPTTSS QAYYHEMVVG EDKTENGQLF PEDKKTILSE EIQDNINEEN 300 ACIPLGCKVE TQQRGVRRRC LVFEASGYSH RTVQKEYVGD LSFSTSKGKS SAQNHRNPGK 360 TPSPHVFRGI GLHLNALALT SKDKMACQDP LATALVPSLK TEQDVHGNLL SAGGNFVHSG 420 SGSLDLQMDN DDCSVGGFLG NDHNSSQSSS PPKKRRKSDN GDDDSCKRCS CKKSKCLKLY 480 CECFAAGVYC SEPCSCQGCL NKPIHEEIVL STRKQIEFRN PLAFAPKVIR MSEAGQETQV 540 GNFINKLIST SVGHYTLLCD AEIL

Sequence ? help Back to Top

Protein Sequence Length: 564 aa Download sequence

ARAEDSPLFG FIDSLSPIEP LKSAYSGNGL QAYHQSLNAA SVSSIFTSPH HNAHKEGSKL  60
SKSSFGDYTE NEISMEDGTD KNKSPTSSTA VRLFACTSTI TRESHTMITC SVNEGIVDPP  120
KEPNDLPQPG RFDSGSPDHN TAPCHGVSVR SDLKQDKCPK LEAVQATNNT VEKRKCLFSS  180
DMQPQDGCQP AKENNEVMGC EWEDLVSVTS GELLAFDSSM DQHHTGVQLA VNNAESCGYL  240
LSKLAGGADI PDRTHPTTSS QAYYHEMVVG EDKTENGQLF PEDKKTILSE EIQDNINEEN  300
ACIPLGCKVE TQQRGVRRRC LVFEASGYSH RTVQKEYVGD LSFSTSKGKS SAQNHRNPGK  360
TPSPHVFRGI GLHLNALALT SKDKMACQDP LATALVPSLK TEQDVHGNLL SAGGNFVHSG  420
SGSLDLQMDN DDCSVGGFLG NDHNSSQSSS PPKKRRKSDN GDDDSCKRCS CKKSKCLKLY  480
CECFAAGVYC SEPCSCQGCL NKPIHEEIVL STRKQIEFRN PLAFAPKVIR MSEAGQETQV  540
GNFINKLIST SVGHYTLLCD AEIL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	452	458	PKKRRKS
2	453	457	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	3e-32	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG004770.2