PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG004770.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 774aa MW: 83569.2 Da PI: 6.9586

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG004770.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50.4	4.4e-16	463	501	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+C+CkkskClk+YCeCfaag++Cse C+C++C Nk TRIDC4BG004770.3 463 SCKRCSCKKSKCLKLYCECFAAGVYCSEPCSCQGCLNKP 501 689**********************************96 PP
2	TCR	49.3	9.9e-16	548	587	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+gCnCkks+ClkkYCeC++ g+ Cs++C+Ce CkN+ TRIDC4BG004770.3 548 RHKRGCNCKKSSCLKKYCECYQGGVGCSNNCRCETCKNTF 587 589***********************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 774 aa Download sequence
MQDSPLFGFI DSLSPIEPLK SAYSGNGLQA YHQSLNAASV SSIFTSPHHN AHKEGSKLSK 60 SSFGDYTENE ISMEDGTDKN KSPTSSTAVR LFACTSTITR ESHTMITCSV NEGIVDPPKE 120 PNDLPQPGRF DSGSPDHNTA PCHGVSVRSD LKQDKCPKLE AVQATNNTVE KRKCLFSSDM 180 QPQDGCQPAK ENNEVMGCEW EDLVSVTSGE LLAFDSSMDQ HHTGVQLAVN NAESCGYLLS 240 KLAGGADIPD RTHPTTSSQA YYHEMVVGED KTENGQLFPE DKKTILSEEI QDNINEENAC 300 IPLGCKVETQ QRGVRRRCLV FEASGYSHRT VQKEYVGDLS FSTSKGKSSA QNHRNPGKTP 360 SPHVFRGIGL HLNALALTSK DKMACQDPLA TALVPSLKTE QDVHGNLLSA GGNFVHSGSG 420 SLDLQMDNDD CSVGGFLGND HNSSQSSSPP KKRRKSDNGD DDSCKRCSCK KSKCLKLYCE 480 CFAAGVYCSE PCSCQGCLNK PIHEEIVLST RKQIEFRNPL AFAPKVIRMS EAGQETQEDP 540 KNTPASARHK RGCNCKKSSC LKKYCECYQG GVGCSNNCRC ETCKNTFGTR DVAVSAENEE 600 MKQEGDQTEN REQEKENDQQ KANVHSEDHK LVELVVPITP PLDVSSCLLK QPNFSNAKPP 660 RPCKARSGSS SRPSKASETV QSRKTSKAGD SVFIEEMPGI LREPSSPGIV KTCSPNGKRV 720 SPPHNALGVS PSRKGGRKLI LKSIPSFPSL AGDANGGSAT CSSDSATALA LGPS

Sequence ? help Back to Top

Protein Sequence Length: 774 aa Download sequence

MQDSPLFGFI DSLSPIEPLK SAYSGNGLQA YHQSLNAASV SSIFTSPHHN AHKEGSKLSK  60
SSFGDYTENE ISMEDGTDKN KSPTSSTAVR LFACTSTITR ESHTMITCSV NEGIVDPPKE  120
PNDLPQPGRF DSGSPDHNTA PCHGVSVRSD LKQDKCPKLE AVQATNNTVE KRKCLFSSDM  180
QPQDGCQPAK ENNEVMGCEW EDLVSVTSGE LLAFDSSMDQ HHTGVQLAVN NAESCGYLLS  240
KLAGGADIPD RTHPTTSSQA YYHEMVVGED KTENGQLFPE DKKTILSEEI QDNINEENAC  300
IPLGCKVETQ QRGVRRRCLV FEASGYSHRT VQKEYVGDLS FSTSKGKSSA QNHRNPGKTP  360
SPHVFRGIGL HLNALALTSK DKMACQDPLA TALVPSLKTE QDVHGNLLSA GGNFVHSGSG  420
SLDLQMDNDD CSVGGFLGND HNSSQSSSPP KKRRKSDNGD DDSCKRCSCK KSKCLKLYCE  480
CFAAGVYCSE PCSCQGCLNK PIHEEIVLST RKQIEFRNPL AFAPKVIRMS EAGQETQEDP  540
KNTPASARHK RGCNCKKSSC LKKYCECYQG GVGCSNNCRC ETCKNTFGTR DVAVSAENEE  600
MKQEGDQTEN REQEKENDQQ KANVHSEDHK LVELVVPITP PLDVSSCLLK QPNFSNAKPP  660
RPCKARSGSS SRPSKASETV QSRKTSKAGD SVFIEEMPGI LREPSSPGIV KTCSPNGKRV  720
SPPHNALGVS PSRKGGRKLI LKSIPSFPSL AGDANGGSAT CSSDSATALA LGPS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	450	456	PKKRRKS
2	451	455	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	2e-79	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG004770.3