PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG004770.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 641aa MW: 69984.7 Da PI: 6.2049

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG004770.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50.7	3.5e-16	453	491	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+C+CkkskClk+YCeCfaag++Cse C+C++C Nk TRIDC4BG004770.4 453 SCKRCSCKKSKCLKLYCECFAAGVYCSEPCSCQGCLNKP 491 689**********************************96 PP
2	TCR	49.6	7.9e-16	538	577	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+gCnCkks+ClkkYCeC++ g+ Cs++C+Ce CkN+ TRIDC4BG004770.4 538 RHKRGCNCKKSSCLKKYCECYQGGVGCSNNCRCETCKNTF 577 589***********************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 641 aa Download sequence
DSLSPIEPLK SAYSGNGLQA YHQSLNAASV SSIFTSPHHN AHKEGSKLSK SSFGDYTENE 60 ISMEDGTDKN KSPTSSTAVR LFACTSTITR ESHTMITCSV NEGIVDPPKE PNDLPQPGRF 120 DSGSPDHNTA PCHGVSVRSD LKQDKCPKLE AVQATNNTVE KRKCLFSSDM QPQDGCQPAK 180 ENNEVMGCEW EDLVSVTSGE LLAFDSSMDQ HHTGVQLAVN NAESCGYLLS KLAGGADIPD 240 RTHPTTSSQA YYHEMVVGED KTENGQLFPE DKKTILSEEI QDNINEENAC IPLGCKVETQ 300 QRGVRRRCLV FEASGYSHRT VQKEYVGDLS FSTSKGKSSA QNHRNPGKTP SPHVFRGIGL 360 HLNALALTSK DKMACQDPLA TALVPSLKTE QDVHGNLLSA GGNFVHSGSG SLDLQMDNDD 420 CSVGGFLGND HNSSQSSSPP KKRRKSDNGD DDSCKRCSCK KSKCLKLYCE CFAAGVYCSE 480 PCSCQGCLNK PIHEEIVLST RKQIEFRNPL AFAPKVIRMS EAGQETQEDP KNTPASARHK 540 RGCNCKKSSC LKKYCECYQG GVGCSNNCRC ETCKNTFGTR DVAVSAENEE MKQEGDQTEN 600 REQEKENDQQ KANVHSEDHK LVELVVPITP PLDVSRFVGT F

Sequence ? help Back to Top

Protein Sequence Length: 641 aa Download sequence

DSLSPIEPLK SAYSGNGLQA YHQSLNAASV SSIFTSPHHN AHKEGSKLSK SSFGDYTENE  60
ISMEDGTDKN KSPTSSTAVR LFACTSTITR ESHTMITCSV NEGIVDPPKE PNDLPQPGRF  120
DSGSPDHNTA PCHGVSVRSD LKQDKCPKLE AVQATNNTVE KRKCLFSSDM QPQDGCQPAK  180
ENNEVMGCEW EDLVSVTSGE LLAFDSSMDQ HHTGVQLAVN NAESCGYLLS KLAGGADIPD  240
RTHPTTSSQA YYHEMVVGED KTENGQLFPE DKKTILSEEI QDNINEENAC IPLGCKVETQ  300
QRGVRRRCLV FEASGYSHRT VQKEYVGDLS FSTSKGKSSA QNHRNPGKTP SPHVFRGIGL  360
HLNALALTSK DKMACQDPLA TALVPSLKTE QDVHGNLLSA GGNFVHSGSG SLDLQMDNDD  420
CSVGGFLGND HNSSQSSSPP KKRRKSDNGD DDSCKRCSCK KSKCLKLYCE CFAAGVYCSE  480
PCSCQGCLNK PIHEEIVLST RKQIEFRNPL AFAPKVIRMS EAGQETQEDP KNTPASARHK  540
RGCNCKKSSC LKKYCECYQG GVGCSNNCRC ETCKNTFGTR DVAVSAENEE MKQEGDQTEN  600
REQEKENDQQ KANVHSEDHK LVELVVPITP PLDVSRFVGT F

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	440	446	PKKRRKS
2	441	445	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	2e-65	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG004770.4