PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG005070.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 478aa    MW: 53977.8 Da    PI: 10.7571
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG005070.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.53.1e-101992791299
                       HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                        ++++++p +  ++ g+    s t++le ++g  + + +  ++k g+ vl++GW +Fv  ++++e+ ++ F + g+s+f  +v++f++
  TRIDC4BG005070.1 199 FRHNMCIPQEVGNHLGS--MISETIKLEAPNG-IFHIGV--CRKTGELVLQSGWDKFVAMHHIEENYSFWFVYRGNSTF--KVRIFNS 279
                       45679***999955554..47889*****998.688899..9999****************************999999..9999875 PP
2B3413.3e-133754741100
                       EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS.-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SS.S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg.rsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgr.s 88 
                       f++v+t+  v+ ++ l++ +++ +++      +++k l+l+ e    +W  +l       r  ++++GWkeFv  n+++egD+++F++ ++ +
  TRIDC4BG005070.1 375 FVTVMTKTWVNGRN-LRFCREYSSRYipP--MRKGKPLMLQAEGRtTEWPARL--GIDATRvNWIRRGWKEFVAGNDVREGDICLFERAKStT 462
                       67788888888887.88888888888553..44566688888544499*****..444444489***********************998879 PP

                       EE..EEEEE-SS CS
                B3  89 efelvvkvfrks 100
                       + +++v+++rks
  TRIDC4BG005070.1 463 RLRMTVHFLRKS 474
                       999999999985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 478 aa     Download sequence    
LLCSVFVPCY GSNLLRSHGT TQCSGAPPPA SLLRLRPATP RRPRSGAPPP PSPASTPYKI  60
CERRRRQWRP RVSAPPPAPP RRRRWGQIRL LHPSPIYGSR RPPPAALNRA SRRPGAPRVP  120
PPTSPVHEPG RPQISRTSVH YPPQAAAPLP RLSTRSEWRR LQEERRSARE SCTMWWQHYL  180
LNHVGDDKTH FVAMATGGFR HNMCIPQEVG NHLGSMISET IKLEAPNGIF HIGVCRKTGE  240
LVLQSGWDKF VAMHHIEENY SFWFVYRGNS TFKVRIFNSN DHEMTTSCSQ PPQSFGGVPS  300
AATCDHHVLN GYEAHMLNER ASVEFGVDLE PHSSGNLEGP SQHSYILAAG ITLGAVETKK  360
VEEKVQAIQS ALPIFVTVMT KTWVNGRNLR FCREYSSRYI PPMRKGKPLM LQAEGRTTEW  420
PARLGIDATR VNWIRRGWKE FVAGNDVREG DICLFERAKS TTRLRMTVHF LRKSDMEV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16384RRRRQWRPRVSAPPPAPPRRRR
26485RRRRQWRPRVSAPPPAPPRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.16e-19B3 family protein