PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG005070.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 365aa    MW: 41390.1 Da    PI: 9.0384
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG005070.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.12e-10861661299
                       HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                        ++++++p +  ++ g+    s t++le ++g  + + +  ++k g+ vl++GW +Fv  ++++e+ ++ F + g+s+f  +v++f++
  TRIDC4BG005070.7  86 FRHNMCIPQEVGNHLGS--MISETIKLEAPNG-IFHIGV--CRKTGELVLQSGWDKFVAMHHIEENYSFWFVYRGNSTF--KVRIFNS 166
                       45679***999955554..47889*****998.688899..9999****************************999999..9999875 PP
2B341.72.1e-132623611100
                       EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS.-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SS.S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg.rsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgr.s 88 
                       f++v+t+  v+ ++ l++ +++ +++      +++k l+l+ e    +W  +l       r  ++++GWkeFv  n+++egD+++F++ ++ +
  TRIDC4BG005070.7 262 FVTVMTKTWVNGRN-LRFCREYSSRYipP--MRKGKPLMLQAEGRtTEWPARL--GIDATRvNWIRRGWKEFVAGNDVREGDICLFERAKStT 349
                       67788888888887.88888888888553..44566688888544499*****..444444489***********************998879 PP

                       EE..EEEEE-SS CS
                B3  89 efelvvkvfrks 100
                       + +++v+++rks
  TRIDC4BG005070.7 350 RLRMTVHFLRKS 361
                       999999999985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    
GAPRVPPPTS PVHEPGRPQI SRTSVHYPPQ AAAPLPRLST RLSEWRRLQE ERRSARESCT  60
MWWQHYLLNH VGDDKTHFVA MATGGFRHNM CIPQEVGNHL GSMISETIKL EAPNGIFHIG  120
VCRKTGELVL QSGWDKFVAM HHIEENYSFW FVYRGNSTFK VRIFNSNDHE MTTSCSQPPQ  180
SFGGVPSAAT CDHHVLNGYE AHMLNERASV EFGVDLEPHS SGNLEGPSQH SYILAAGITL  240
GAVETKKVEE KVQAIQSALP IFVTVMTKTW VNGRNLRFCR EYSSRYIPPM RKGKPLMLQA  300
EGRTTEWPAR LGIDATRVNW IRRGWKEFVA GNDVREGDIC LFERAKSTTR LRMTVHFLRK  360
SDMEV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.13e-19B3 family protein