PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG005160.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 283aa    MW: 32379.6 Da    PI: 8.6111
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG005160.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR136.81.3e-1156135190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fYn Y+ e GF +r  ks+ + + +    ++ vC + gk+  e+++         + r++C a + + ++kd+ w++++ +  HnH+l+
  TRIDC4BG005160.3  56 DFYNLYSWEKGFGIRYGKSRLNVNRT-KCIQEIVCGCAGKPIVENTR---------SCRCECPALVILLRSKDNGWYIAEHRDGHNHSLS 135
                       6*****************99995555.566789******99886555.........99******************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
GNRVRLGAAA EGRAPCSDRV TALEKTVREF AEHPGDIVMI KPKIGTTFDS LGEAYDFYNL  60
YSWEKGFGIR YGKSRLNVNR TKCIQEIVCG CAGKPIVENT RSCRCECPAL VILLRSKDNG  120
WYIAEHRDGH NHSLSQTYDQ TIHWPSHKHI NVYSMDLVKQ LRQNNVNLAK VYNIIGSSFG  180
KMENVSFTKR ALRTLCGKIS REQSEDDVRK TMEVFQELCS KDQQFTYRVQ ADNEGRISNL  240
MWATGNSRLQ YNFFGDVVTF DTTYRTNLYD IPFGLFVGVN NHF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.11e-26FAR1 family protein