PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG005880.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YA
Protein Properties Length: 195aa    MW: 22037.4 Da    PI: 7.9786
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG005880.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA103.32.1e-32104160158
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                       +ep+YVNaKQy++Il+RRq+Rak+e e+k  +k+rkpylheSRh+hA+rR+Rg+gGrF
  TRIDC4BG005880.1 104 EEPVYVNAKQYHGILRRRQSRAKAELERKA-IKARKPYLHESRHQHAMRRARGTGGRF 160
                       69***************************9.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
KTVDDDDARA ESSDDDSPRS GEPKDGSFDE EKQHATSRMP ALASDYLPPY SQLELNQPIA  60
SAAYPYPDAY YTGMVGPYEV HAVTHFQLPG LTHPRMPLPL EVSEEPVYVN AKQYHGILRR  120
RQSRAKAELE RKAIKARKPY LHESRHQHAM RRARGTGGRF LNTKKDENGG RTEASKGEQS  180
SEYLRVPPDL HLRQA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20910.15e-38NF-YA family protein