PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG005880.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YA
Protein Properties Length: 194aa    MW: 22128.1 Da    PI: 9.3964
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG005880.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA103.42.1e-32103159158
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                       +ep+YVNaKQy++Il+RRq+Rak+e e+k  +k+rkpylheSRh+hA+rR+Rg+gGrF
  TRIDC4BG005880.2 103 EEPVYVNAKQYHGILRRRQSRAKAELERKA-IKARKPYLHESRHQHAMRRARGTGGRF 159
                       69***************************9.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
SCPMYCFLPI KSLILGVEWL QQNDGSFDEE KQHATSRMPA LASDYLPPYS QLELNQPIAS  60
AAYPYPDAYY TGMVGPYEVH AVTHFQLPGL THPRMPLPLE VSEEPVYVNA KQYHGILRRR  120
QSRAKAELER KAIKARKPYL HESRHQHAMR RARGTGGRFL NTKKDENGGR TEASKGEQSS  180
EYLRVPPDLH LRQA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20910.11e-37NF-YA family protein