PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG005880.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YA
Protein Properties Length: 188aa    MW: 21414.2 Da    PI: 9.7262
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG005880.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA103.42e-3297153158
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                       +ep+YVNaKQy++Il+RRq+Rak+e e+k  +k+rkpylheSRh+hA+rR+Rg+gGrF
  TRIDC4BG005880.3  97 EEPVYVNAKQYHGILRRRQSRAKAELERKA-IKARKPYLHESRHQHAMRRARGTGGRF 153
                       69***************************9.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
IKSLILGVEW LQQNDGSFDE EKQHATSRMP ALASDYLPPY SQLELNQPIA SAAYPYPDAY  60
YTGMVGPYEV HAVLSQTHFQ LPGLTHPRMP LPLEVSEEPV YVNAKQYHGI LRRRQSRAKA  120
ELERKAIKAR KPYLHESRHQ HAMRRARGTG GRFLNTKKDE NGGRTEASKG EQSSEYLRVP  180
PDLHLRQA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20910.14e-36NF-YA family protein