PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG006710.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family TCP
Protein Properties Length: 354aa    MW: 38233.7 Da    PI: 7.6353
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG006710.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP154.75.6e-481072611136
               TCP   1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg.... 88 
                       aa++kdrhski+T++g+RdRR+Rls+++a++fF+Lqd+LGfdk+skt++WLl+ +k ai e + +  +++s+c e++sss s+   +++    
  TRIDC4BG006710.1 107 AAARKDRHSKICTAGGMRDRRMRLSLDVARKFFALQDMLGFDKASKTVQWLLNTSKGAIREVMTD--EASSDCeEDGSSSLSVVDGKHKppgt 197
                       589**************************************************************..66666976666665555333335677 PP

               TCP  89 ...............kaaksaa.kskksqksaasalnlakesrakarararertrekmriknkl 136
                                      +aa+ a+ ++k+++k a+++  ++kesr kar+rarertrek+r+++++
  TRIDC4BG006710.1 198 eaeggdhgegkkqvpRAARRAPaNPKPQRKLASAHPIPDKESRTKARERARERTREKNRMRWVT 261
                       7788888888999995555555499999999999999999*********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MFPFYDSPSP MDLPLYQQLQ ISPPSPKAPD HQSLLYYHSS PAFAADSFHH SYLCAGAATP  60
TPPAAEIDNQ SPPELLLMDQ APAPRADGVG TAQGLHGGGG LDSAAAAAAR KDRHSKICTA  120
GGMRDRRMRL SLDVARKFFA LQDMLGFDKA SKTVQWLLNT SKGAIREVMT DEASSDCEED  180
GSSSLSVVDG KHKPPGTEAE GGDHGEGKKQ VPRAARRAPA NPKPQRKLAS AHPIPDKESR  240
TKARERARER TREKNRMRWV TLASTINIEP AATGMAAARA DEFVTRPNNL ISRSSSMNTA  300
RAELEEGCSS SMPSEAIMAG FGNGGYGSSG NYYQYQLEQQ WELGGVVFPN SQPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.12e-24TCP family protein