PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG006760.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 441aa    MW: 46836.8 Da    PI: 5.5846
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG006760.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS465.53.1e-142534371374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl...fsevsPi 90 
                       lv++Ll+cAeav+++++++a+al++++  la+++g +m+++aayf eALa+r++r        ++p+++s  +  ++++a+ l   f+e +P+
  TRIDC4BG006760.3  53 LVHALLACAEAVQQENFSAAEALVKQIPLLAASQGGAMRKVAAYFGEALARRVFR--------FRPQPDS--SLLDAAFADLLhahFYESCPY 135
                       689****************************************************........5555555..34444444444456******* PP

              GRAS  91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlva 183
                       lkf+h+taNqaIlea++g++rvH++Df+i+qG+QWpaLlqaLa Rp+gpps+R+Tgvg+p+++++++l+++g++La+fA++++v+f+++ lva
  TRIDC4BG006760.3 136 LKFAHFTANQAILEAFAGCRRVHVVDFGIKQGMQWPALLQALALRPGGPPSFRLTGVGPPQPDETDALQQVGWKLAQFAHTIRVDFQYRGLVA 228
                       ********************************************************************************************* PP

              GRAS 184 krledleleeLrvkp.......gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfd 269
                        +l+dle+ +L+ +         E++aVn+v+++hrll+++++le+    vL +v+ ++P++v+vveqea+hns++Fl+rf+e+l+yys++fd
  TRIDC4BG006760.3 229 ATLADLEPFMLQPEGeedpneePEVIAVNSVFEMHRLLAQPGALEK----VLGTVRAVRPRIVTVVEQEANHNSGTFLDRFTESLHYYSTMFD 317
                       ***********544444557789***********************....******************************************* PP

              GRAS 270 sleak..............lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sd 347
                       sle +              +p+++ +++++++++lgr+i+nvvacegaer+erhetl++Wr+rl++aGF++v+l+++a+kqa++ll+ ++ +d
  TRIDC4BG006760.3 318 SLEGGssggpsevssgaaaAPAAAGTDQVMSEVYLGRQICNVVACEGAERTERHETLGQWRNRLGNAGFETVHLGSNAYKQASTLLALFAgGD 410
                       **98889**********9999999********************************************************************* PP

              GRAS 348 gyrveeesgslvlgWkdrpLvsvSaWr 374
                       gy+vee++g+l+lgW++rpL+++SaWr
  TRIDC4BG006760.3 411 GYKVEEKEGCLTLGWHTRPLIATSAWR 437
                       **************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 441 aa     Download sequence    
GGSSTSSSSS SSSLGGGGAR SSVVEAAPPV AAAAGAPALP VVVVDTQEAG IRLVHALLAC  60
AEAVQQENFS AAEALVKQIP LLAASQGGAM RKVAAYFGEA LARRVFRFRP QPDSSLLDAA  120
FADLLHAHFY ESCPYLKFAH FTANQAILEA FAGCRRVHVV DFGIKQGMQW PALLQALALR  180
PGGPPSFRLT GVGPPQPDET DALQQVGWKL AQFAHTIRVD FQYRGLVAAT LADLEPFMLQ  240
PEGEEDPNEE PEVIAVNSVF EMHRLLAQPG ALEKVLGTVR AVRPRIVTVV EQEANHNSGT  300
FLDRFTESLH YYSTMFDSLE GGSSGGPSEV SSGAAAAPAA AGTDQVMSEV YLGRQICNVV  360
ACEGAERTER HETLGQWRNR LGNAGFETVH LGSNAYKQAS TLLALFAGGD GYKVEEKEGC  420
LTLGWHTRPL IATSAWRLAA P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.11e-180GRAS family protein