PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG008060.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 448aa MW: 47009.6 Da PI: 4.842

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG008060.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.9	6.6e-12	268	310	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++P + K++ a+iL A+eY+k+L TRIDC4BG008060.2 268 MAERRRRKKLNDRLYALRSVVPRiS------KMDRASILGDAIEYLKEL 310 79*******************66......**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
GGFPAPPMLD EVSWYFNPGA VGDAAGNGSM IPAPATMEAS GSNSGFGDAS QMFPLLNPGV 60 GGTGPLDVPG FNLDICGDLS AFLGAGNAPN ASLLPHGNTD FLGSFGGFGT APAQTTDFGG 120 LVGFDLLDTG AQGWSGPSSE GPAAPVSQTA AFSGQGNAKV LRPLENFPAS GAQPTLFQKR 180 ALRRNAGEED GERRKRKAAE PDIILDDADD DIISIDASGL NYDSEDGRGV EESGRKDGNE 240 SNANSTVTGG AAAEGSGKKK GMPAKNLMAE RRRRKKLNDR LYALRSVVPR ISKMDRASIL 300 GDAIEYLKEL TQKINVLQNE LEASPSTSSL PPTPTSFRPP TPTMPALPSR VKEELTSSPA 360 QEPRVEVKLR EGRVVNIRMM CSRRPGVVHS SLKALEGLGL DVQQAVISYF NDFTLDVFKA 420 EQCKDGPGPQ AEEIKAVLLQ SAGFHPAA

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

GGFPAPPMLD EVSWYFNPGA VGDAAGNGSM IPAPATMEAS GSNSGFGDAS QMFPLLNPGV  60
GGTGPLDVPG FNLDICGDLS AFLGAGNAPN ASLLPHGNTD FLGSFGGFGT APAQTTDFGG  120
LVGFDLLDTG AQGWSGPSSE GPAAPVSQTA AFSGQGNAKV LRPLENFPAS GAQPTLFQKR  180
ALRRNAGEED GERRKRKAAE PDIILDDADD DIISIDASGL NYDSEDGRGV EESGRKDGNE  240
SNANSTVTGG AAAEGSGKKK GMPAKNLMAE RRRRKKLNDR LYALRSVVPR ISKMDRASIL  300
GDAIEYLKEL TQKINVLQNE LEASPSTSSL PPTPTSFRPP TPTMPALPSR VKEELTSSPA  360
QEPRVEVKLR EGRVVNIRMM CSRRPGVVHS SLKALEGLGL DVQQAVISYF NDFTLDVFKA  420
EQCKDGPGPQ AEEIKAVLLQ SAGFHPAA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	258	276	KKKGMPAKNLMAERRRRKK
2	270	277	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	2e-75	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG008060.2