PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG008190.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 242aa    MW: 27631.6 Da    PI: 7.9464
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG008190.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.31.7e-18449147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      rg W + Ede+l+++v+++G+++W++Ia++++ gR++k+c++rw++ 
  TRIDC4BG008190.2  4 RGHWRPSEDERLKELVARYGPHNWNAIAEKLQ-GRSGKSCRLRWFNQ 49
                      899*****************************.***********996 PP
2Myb_DNA-binding52.41.2e-165699146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                      r ++++eE+ell+  ++ +G++ W+ Iar ++ gRt++ +k++w+ 
  TRIDC4BG008190.2 56 RSPFSEEEEELLLASHRVHGNR-WAVIARLFP-GRTDNAVKNHWHV 99
                      789*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MCTRGHWRPS EDERLKELVA RYGPHNWNAI AEKLQGRSGK SCRLRWFNQL DPRINRSPFS  60
EEEEELLLAS HRVHGNRWAV IARLFPGRTD NAVKNHWHVI MARRCRERMR LSSNRRATPA  120
AASTTTAGAE KDDSPRNTTG GEKPRLPEVN TMAALLHKYR REFAAPFAIS RHSSKEGYCS  180
STNEDTNRSV EFYDFLQVNV SSSDTKCGSS IEEQEENRDE GDQQAEGQVS LIDFMEVGTS  240
HQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17950.13e-70MYB family protein