PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG009100.10
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 237aa    MW: 26364.9 Da    PI: 8.4956
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG009100.10genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.57.6e-1198146355
                        HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  TRIDC4BG009100.10  98 NSHSLAERLRRKKISERMKLLQDLVPGC----NKITGKAVMLDEIINYVQSLQ 146
                        58**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
METSIILAGT FSQNIQMSDE HSGGMKKRKG TDECIALLNP SNVGDQQTKV SSQPERNSAE  60
RDNRKISPKT QSKEDSSDGD GTRENYVHFR AKRGQATNSH SLAERLRRKK ISERMKLLQD  120
LVPGCNKITG KAVMLDEIIN YVQSLQRQVE FLSMKLATVN PELGFDIEQI LSKQVMLSQD  180
RRLGFYGADP GSSALIAHFN QGMMHPDMMC NASNPAGALH GTIHDISMMN QVNSVHF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.13e-56bHLH family protein