PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG009100.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 322aa    MW: 35523.9 Da    PI: 7.0103
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG009100.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.81.2e-10154202355
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  TRIDC4BG009100.9 154 NSHSLAERLRRKKISERMKLLQDLVPGC----NKITGKAVMLDEIINYVQSLQ 202
                       58**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MYSGQQSDQG PAANSGKEFL EGNWGSVAMH QKMGYDSAAY GFQAYGMELE ERPGMYRSSA  60
GTFSQNIQMS DEHSGGMKKR KGTDECIALL NPSASSKNVG DQQTKVSSQP ERNSAERDNR  120
KISPKTQSKE DSSDGDGTRE NYVHFRAKRG QATNSHSLAE RLRRKKISER MKLLQDLVPG  180
CNKITGKAVM LDEIINYVQS LQRQVEFLSM KLATVNPELG FDIEQILSKQ VMLSQDRRLG  240
FYGADPGSSA LIAHFNQGMM HPDMMCNASN PAGALHGTIH DISMMNQMPE MWETLQNIPH  300
MNFNPAVAAD SSTNNAGICN AL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.12e-55bHLH family protein