PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG010100.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GATA

Protein Properties

Length: 197aa MW: 21324.7 Da PI: 10.3238

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG010100.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	51.3	1.6e-16	138	174	1	35
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C+nCg+++ Tp +Rrgp g++tLCnaCGl+++ kg+ TRIDC4BG010100.1 138 CQNCGVSSrlTPAMRRGPAGPRTLCNACGLMWANKGT 174 **********************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 197 aa Download sequence
ADALLSAASE QLTLVYQGEV YVFDPVPPQK VQAALLVLGG CEVPPGLVSM AGPTAYAEKS 60 TTVAAKRVAS LMRFREKRKE RCFDKKIRYG VRKEVAQKMK RRKGQFAGRA DFGDAASSSA 120 ACVSAVDGED DHFRESHCQN CGVSSRLTPA MRRGPAGPRT LCNACGLMWA NKGTLRSPLN 180 APKMTVQHPV NPSKMVR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51600.2	1e-51	GATA family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG010100.1