PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG010100.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GATA

Protein Properties

Length: 100aa MW: 10843.5 Da PI: 8.5145

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG010100.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	53.1	4.4e-17	18	54	1	35
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C+nCg+++ Tp +Rrgp g++tLCnaCGl+++ kg+ TRIDC4BG010100.7 18 CQNCGVSSrlTPAMRRGPAGPRTLCNACGLMWANKGT 54 **********************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 100 aa Download sequence
VSLQSMARMI ISENPSDCQN CGVSSRLTPA MRRGPAGPRT LCNACGLMWA NKGTLRSPLN 60 APKMTVQHPV NPSKMESVDD DKAIVCAERN HTAVKMDSEM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51600.2	2e-20	GATA family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG010100.7