PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG010100.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 219aa    MW: 23863.3 Da    PI: 9.1567
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG010100.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA51.11.9e-16115151135
              GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C+nCg+++  Tp +Rrgp g++tLCnaCGl+++ kg+
  TRIDC4BG010100.8 115 CQNCGVSSrlTPAMRRGPAGPRTLCNACGLMWANKGT 151
                       **********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
YFLSVIQVQA ALLVLGGCEV PPGLVSMAGP TAYAEKSTTV AAKRVASLMR FREKRKERCF  60
DKKIRYGVRK EVAQKMKRRK GQFAGRADFG DAASSSAACV SAVDGEDDHF RESHCQNCGV  120
SSRLTPAMRR GPAGPRTLCN ACGLMWANKG TLRSPLNAPK MTVQHPVNPS KMESVDDDKA  180
IVCAERNHTA VKMDSEMSPE QEQKPELRPA TEGDTMADS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51600.23e-41GATA family protein