PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG010100.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 248aa    MW: 26411.1 Da    PI: 7.9867
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG010100.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA50.82.2e-16165201135
              GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C+nCg+++  Tp +Rrgp g++tLCnaCGl+++ kg+
  TRIDC4BG010100.9 165 CQNCGVSSrlTPAMRRGPAGPRTLCNACGLMWANKGT 201
                       **********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MAAEPAADGQ DPPLADAASG DDDAAAAADA LLSAASEQLT LVYQGEVYVF DPVPPQKVQA  60
ALLVLGGCEV PPGLVSMAGP TAYAEKSTTV AAKRVASLMR FREKRKERCF DKKIRYGVRK  120
EVAQKMKRRK GQFAGRADFG DAASSSAACV SAVDGEDDHF RESHCQNCGV SSRLTPAMRR  180
GPAGPRTLCN ACGLMWANKG TLRSPLNAPK MTVQHPVNPS KMESVDDDKA IVCAERNHTA  240
VKMDSEMV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51600.21e-52GATA family protein