PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG011260.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 655aa    MW: 75573.9 Da    PI: 7.5784
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG011260.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.32.4e-17341121498
                       T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                       + +++p +f++++ g+   +k+++le+++g  ++v +   k++++ vl++GW+ Fv+  +L+  D+vvF+++g+s+f  +v vf+
  TRIDC4BG011260.1  34 REMTIPDDFLKRFRGE--IPKEIKLETRNGHIYTVGV--AKYPDKLVLRAGWETFVETYDLRIDDSVVFRYNGNSQF--NVIVFD 112
                       569**********777..7889***************..**********************************9999..777766 PP
2B348.81.2e-15343433397
                       EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS
                B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 
                         +++ +v+ +  l++pk+++++h g++e++  + l+ + g+ Wev++   +++++  + +GW++Fvk+n+++ gD+++F+l ++ +  ++ v
  TRIDC4BG011260.1 343 AMMSKCNVTGTFTLSVPKEYVKRHVGDTERN--ICLQ-RLGKGWEVQF--GGRPEEKRIISGWRRFVKDNDVEMGDICIFELLKKcKMCTMEV 430
                       5566777888899***********8887774..7755.69********..99999988999********************988666666666 PP

                       EEE CS
                B3  95 kvf 97 
                       +++
  TRIDC4BG011260.1 431 HII 433
                       665 PP
3B339.41.1e-12559651399
                       EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS
                B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 
                         + + +v+ +  l+++kk+++++ g++ +s  + le   g++ +v +   +k++   + +GW +Fvkan++++gD+++F+l ++ +   ++v
  TRIDC4BG011260.1 559 AMMQQTNVTGRYTLSISKKYINKYLGDEVQS--ICLER-LGERCQVWF--GRKPQDKRIVGGWTKFVKANEVEVGDICLFELLKHrKLCAMKV 646
                       5566778888899***********8887786..77665.788899999..8889998899*********************775447667888 PP

                       EEE-S CS
                B3  95 kvfrk 99 
                       +++r+
  TRIDC4BG011260.1 647 HIIRA 651
                       88875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 655 aa     Download sequence    
MGCQRCKRRD ELDYCNLDDR EKHFLMFMVD GCGREMTIPD DFLKRFRGEI PKEIKLETRN  60
GHIYTVGVAK YPDKLVLRAG WETFVETYDL RIDDSVVFRY NGNSQFNVIV FDQFGREKAS  120
SVVVDSAPLY PYVQERQRGA PETHGHSQPH EMQSPTENMN ISQGHPQLMR VQPHTDNMSR  180
SQGHAHHVQM QLPIDNMRRS EGHPQPIQMQ PPSANVDQFV DDSQHMQMQP PSANVDHFVD  240
HSQHMQMQPP TETLNRSNCH PQSRQMQLTC AERQSNLQRN KLNQGNKSVA SSSGGSLCSE  300
DGTNLCDTSR YTLGWNTRLD PVQKEKVDQE IQHISSDNPI FVAMMSKCNV TGTFTLSVPK  360
EYVKRHVGDT ERNICLQRLG KGWEVQFGGR PEEKRIISGW RRFVKDNDVE MGDICIFELL  420
KKCKMCTMEV HIIHTKDIDT PSKICQQRHR EVVKIMEHSH SLPQLKEMQL HNETVEDTIV  480
HPEPVQIQLP SLERRIQLQR DKSSQGSKRD SLSSEDIDHE EGALSDCILA RFTRLTTDQK  540
KAVKEKVQFI DSETPIFVAM MQQTNVTGRY TLSISKKYIN KYLGDEVQSI CLERLGERCQ  600
VWFGRKPQDK RIVGGWTKFV KANEVEVGDI CLFELLKHRK LCAMKVHIIR AKDFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.16e-15B3 family protein