PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG011270.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 686aa MW: 78099.1 Da PI: 8.6253

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG011270.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	48	2.2e-15	109	186	14	97
T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 + +++p +f++++ g+ +++++le+++g s+++ + k++++ vl++GW Fvk +L+ D vvF+++g+s+f v vf TRIDC4BG011270.1 109 QEMIVPDEFLRRFRGE--IPREIKLETRNGHSYTIGV--AKYPDKLVLQAGWGLFVKTYDLRMDDCVVFRYKGNSQF--GVIVF 186 46899******776..6779***********..********************************9999..55555 PP
2	B3	49.4	8.4e-16	435	526	1	96
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 f+ v+ + +v+ ++ l+++kk++++h g+ke+ + ++ g++W+v++ + +++ + +GW++Fvk+n++++gD+++F+l + + ++ TRIDC4BG011270.1 435 FVAVMRRFNVTGTCTLTFSKKYVQTHVGDKERR--VC-LQRFGKRWDVQF--SSSREVKRIVSGWRKFVKDNDVETGDICIFELLKIdEMCTM 522 5566777789999***********7787664..66.557*****..6666667789*******************7644344446 PP EEEE CS B3 93 vvkv 96 v++ TRIDC4BG011270.1 523 EVHI 526 6666 PP

Sequence ? help Back to Top
Protein Sequence Length: 686 aa Download sequence
GRQSSNRGSG GWRESQRHSL IPSPLLSAHP RFSRREPSVL PRRAAPRPQD RRTSRGSRWP 60 GPGSQARPST RSSGKMGCER CERRDELDYC NLDDREKYFL MFIVDDCGQE MIVPDEFLRR 120 FRGEIPREIK LETRNGHSYT IGVAKYPDKL VLQAGWGLFV KTYDLRMDDC VVFRYKGNSQ 180 FGVIVFDRFG REKAFSVITD NAPPVQESHN RGTENVDRSH GHSQPMEVQS PIATANHSDG 240 RPQPMRMQPP TENANPSHAH PQPMRMQPPT ENLDDPVGFS RPMEMQPPTE NVDHLFGHSQ 300 PMQMQPSTEA VDHFAQMQPS TEAVDHSNSH AQTMRMQPSS EVVDHSNDHA QTMQMQLFCR 360 PTKLRQTKLQ WDYSSKGNKT ATSPSDTPNS LSSEHDIEGC ASPRYTLTYN SSLNTVQKEE 420 IEEKVKSIHK DNPIFVAVMR RFNVTGTCTL TFSKKYVQTH VGDKERRVCL QRFGKRWDVQ 480 FSSSREVKRI VSGWRKFVKD NDVETGDICI FELLKIDEMC TMEVHIIHAK DFDRPSQIGG 540 WSVEGRCKEA TTKTVEPSHS RPQLVQMQLC NASVEDSYSL PQPMEMQSPS TERKIRVETV 600 NSSPGNEGDS SMSEDGVTLT GCIGVHLRRI PLVQKKVVKQ KVDLIGSEIP IYVLVMQKTN 660 VTGRFTLSIS KKYVRRHLGD EVRSIW

Sequence ? help Back to Top

Protein Sequence Length: 686 aa Download sequence

GRQSSNRGSG GWRESQRHSL IPSPLLSAHP RFSRREPSVL PRRAAPRPQD RRTSRGSRWP  60
GPGSQARPST RSSGKMGCER CERRDELDYC NLDDREKYFL MFIVDDCGQE MIVPDEFLRR  120
FRGEIPREIK LETRNGHSYT IGVAKYPDKL VLQAGWGLFV KTYDLRMDDC VVFRYKGNSQ  180
FGVIVFDRFG REKAFSVITD NAPPVQESHN RGTENVDRSH GHSQPMEVQS PIATANHSDG  240
RPQPMRMQPP TENANPSHAH PQPMRMQPPT ENLDDPVGFS RPMEMQPPTE NVDHLFGHSQ  300
PMQMQPSTEA VDHFAQMQPS TEAVDHSNSH AQTMRMQPSS EVVDHSNDHA QTMQMQLFCR  360
PTKLRQTKLQ WDYSSKGNKT ATSPSDTPNS LSSEHDIEGC ASPRYTLTYN SSLNTVQKEE  420
IEEKVKSIHK DNPIFVAVMR RFNVTGTCTL TFSKKYVQTH VGDKERRVCL QRFGKRWDVQ  480
FSSSREVKRI VSGWRKFVKD NDVETGDICI FELLKIDEMC TMEVHIIHAK DFDRPSQIGG  540
WSVEGRCKEA TTKTVEPSHS RPQLVQMQLC NASVEDSYSL PQPMEMQSPS TERKIRVETV  600
NSSPGNEGDS SMSEDGVTLT GCIGVHLRRI PLVQKKVVKQ KVDLIGSEIP IYVLVMQKTN  660
VTGRFTLSIS KKYVRRHLGD EVRSIW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	1e-13	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG011270.1