PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG011290.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 292aa    MW: 31853.9 Da    PI: 9.2038
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG011290.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.61.4e-103673198
                      .--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3 31 eesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                      ++s  ++le ++g+ ++v+   +k+s+  +vl++ W  Fv an+++ +D ++F+   + +++l+v +++
  TRIDC4BG011290.9  3 AGSAIIKLEAPDGNIYNVRA--SKHSEDqVVLQSDWDAFVAANHIQLNDLLIFHS--KGKTRLKVLALD 67
                      567789**************..7777777*************************3..356666776665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
EEAGSAIIKL EAPDGNIYNV RASKHSEDQV VLQSDWDAFV AANHIQLNDL LIFHSKGKTR  60
LKVLALDPSG CEKNSSCLDT KNFSKTGEGS VWITDARPCT VEIIDLTSSG DDRTEREDAG  120
RSSGRRKQVP GSHAKARKMA SASSPSTKSG PDTHKLKHPI SNNDNLQGPY RPPYILARGI  180
TLTGCVEKKV QEKVQAIGSE LPIYVAVMTK SCVSGNLFSL VNSAGNMLQL FQAEIKLSYL  240
SWRTRSGTRH YTSKEVGRSF TEAGQSLPVT ITCSWEISAS SKWQSGAREA LR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.12e-08B3 family protein