PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG012450.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

LBD

Protein Properties

Length: 216aa MW: 23784.1 Da PI: 8.2515

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG012450.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	136.1	1.2e-42	7	106	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 +CaaCk+lrrkC+++Cv+apyfp +qp+kfanvhk+FGasnv+kll++lp +reda++sl+yeAear+rdPvyG+v+ i+ lq +++q+++e TRIDC4BG012450.1 7 PCAACKLLRRKCTQGCVFAPYFPPDQPAKFANVHKVFGASNVSKLLNELPVAQREDAVNSLAYEAEARLRDPVYGCVAYISVLQLKIKQVREE 99 7****************************************************************************************** PP DUF260 94 lallkee 100 +a +++e TRIDC4BG012450.1 100 IADARKE 106 99887 PP

Sequence ? help Back to Top
Protein Sequence Length: 216 aa Download sequence
MSSSNSPCAA CKLLRRKCTQ GCVFAPYFPP DQPAKFANVH KVFGASNVSK LLNELPVAQR 60 EDAVNSLAYE AEARLRDPVY GCVAYISVLQ LKIKQVREEI ADARKELAGY IGQAAYAPVV 120 PVQHPHAQYA AAGMGLVQPH PHPHQQMAMQ QQHPYHQQQI AEAQHLAAAV EVARAGQQQQ 180 QQHHHQHQQH EMMMMRQTYG NVHGAAAGPT VAVEPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66870.1	1e-60	LBD family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG012450.1