PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG012560.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 353aa MW: 38715 Da PI: 5.0965

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG012560.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	34.1	4.9e-11	280	320	10	55
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+RR++iN+++ L+ l+P+ +K++ +++Le+AveY+k Lq TRIDC4BG012560.6 280 RKRREKINERLKVLQNLVPNG-----TKVDISTMLEEAVEYVKFLQ 320 9****************97.....8****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
YRSILHCLGA RSFFLLYTPS RKEAQVYQTA KSSLTPYTYI RMESGGVIAE AGWDSLGLTS 60 QAEESEMMEQ LLGTFPSNGE EEHQELPWSV QATHAYYAHC NGSSNAYSSA SSNSVGSLIL 120 DVPSDYGGFY LGDSNGIGSC TAALDLNMVH EQGAAQFMDA IFNPSYGNGD SSCDNLGDSS 180 MNLLDSIDTS NKRKHQDQGK IADQTSGRKY SRKADSKRTK KAMQCEGDDG TTADTSKQSL 240 SCCTSEIDSN AFQEPPVASK PKGKAQAGRQ TTDPQSLYAR KRREKINERL KVLQNLVPNG 300 TKVDISTMLE EAVEYVKFLQ LQIKLLSSDE MWMYAPIAYN GMNIGIDLNL SQH

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

YRSILHCLGA RSFFLLYTPS RKEAQVYQTA KSSLTPYTYI RMESGGVIAE AGWDSLGLTS  60
QAEESEMMEQ LLGTFPSNGE EEHQELPWSV QATHAYYAHC NGSSNAYSSA SSNSVGSLIL  120
DVPSDYGGFY LGDSNGIGSC TAALDLNMVH EQGAAQFMDA IFNPSYGNGD SSCDNLGDSS  180
MNLLDSIDTS NKRKHQDQGK IADQTSGRKY SRKADSKRTK KAMQCEGDDG TTADTSKQSL  240
SCCTSEIDSN AFQEPPVASK PKGKAQAGRQ TTDPQSLYAR KRREKINERL KVLQNLVPNG  300
TKVDISTMLE EAVEYVKFLQ LQIKLLSSDE MWMYAPIAYN GMNIGIDLNL SQH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	280	285	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G14760.1	6e-47	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG012560.6