PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG013090.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 276aa MW: 31023.4 Da PI: 6.1645

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG013090.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	53.6	3.9e-17	116	170	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rkR ++ + q++eLe++F+++++p+++ r L+kk+ ++ +Vk+WFqNrR +k TRIDC4BG013090.4 116 RKRGRHANRQIQELEAMFQQCPHPDENLRIALSKKVCMDPLRVKFWFQNRRNAKK 170 79999**********************************************8777 PP

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence
MQVAPDELCQ LASWDQSGIC LALSDVSFLS GVLDVCGYAR SSRYNTTVVG VLFGNSVAMV 60 GEWQPQNGQV HDEIDLSIPV DDKDLIWSNT GTMDDDEDVA TADEGITDAG SASHMRKRGR 120 HANRQIQELE AMFQQCPHPD ENLRIALSKK VCMDPLRVKF WFQNRRNAKK NQNERQQNMV 180 LRTENIMLEE ENRAMKAAIL KKTCPTCKGP MVFFRPLTPE LRRLHMENAR LKAELLHRTA 240 YLHGVSAGTA GSSRILCDLN VDPVMPLPLR QDDLMA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G04890.1	4e-33	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG013090.4