PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG013090.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 218aa MW: 24926.5 Da PI: 6.8706

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG013090.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	54.1	2.6e-17	58	112	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rkR ++ + q++eLe++F+++++p+++ r L+kk+ ++ +Vk+WFqNrR +k TRIDC4BG013090.5 58 RKRGRHANRQIQELEAMFQQCPHPDENLRIALSKKVCMDPLRVKFWFQNRRNAKK 112 79999**********************************************8777 PP

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence
MVGEWQPQNG QVHDEIDLSI PVDDKDLIWS NTGTMDDDED VATADEGITD AGSASHMRKR 60 GRHANRQIQE LEAMFQQCPH PDENLRIALS KKVCMDPLRV KFWFQNRRNA KKNQNERQQN 120 MVLRTENIML EEENRAMKAA ILKKTCPTCK GPMVFFRPLT PELRRLHMEN ARLKAELLHR 180 TAYLHGVSAG TAGSSRILCD LNVDPVMPLP LRQDDLMA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G04890.1	1e-32	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG013090.5