PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG013930.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HB-other
Protein Properties Length: 181aa    MW: 19432.3 Da    PI: 10.677
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG013930.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox15.43.3e-0563118152
                       TT--SS--HHHHHHHHHHHH....HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS
          Homeobox   1 rrkRttftkeqleeLeelFe....knrypsaeereeLAkklgLterqVkvWFqNrR 52 
                       +r Rt+ft+eq  ++ e+ e    + ++++ ++ ++  +++g++ r+ kvW +N +
  TRIDC4BG013930.1  63 KRFRTKFTAEQKGRMLEFAEnvgwRLQKLDDAMVQHFCQEIGVKRRVLKVWMHNNK 118
                       789*********99987555776678****************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
AAARALPPPP PPPLGHHHQI IMPLNMIQTS ESDEMDGSGG GGIMGDGRGG LASGGGGSSS  60
SKKRFRTKFT AEQKGRMLEF AENVGWRLQK LDDAMVQHFC QEIGVKRRVL KVWMHNNKHN  120
LATRQPPTSP TPPQSQSMPL AMSMPMPLGM SMPMQVPPSQ PGPSGHRGPS SPHAHGELKL  180
D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.12e-26ZF-HD family protein