PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG014550.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 243aa    MW: 26961.4 Da    PI: 9.114
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG014550.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.71.3e-101386099
                      EE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3 60 vltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                      ++++GW eFv+an+L+e  f+vFk++g++ f  +vkvf++
  TRIDC4BG014550.2  1 YFAGGWAEFVRANRLEEENFLVFKYEGNMVF--TVKVFET 38
                      6889***************************..9999986 PP
2B355.41.1e-171592421099
                       HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                       + + + + + kkf+  +g+ +  ++ ++l+d+ grsW vkl  + +s++  +++GW +F   +g+k+gD +vF+l+++++f  +v+++r+
  TRIDC4BG014550.2 159 NIRYSYMNIGKKFCVMNGIAT--NRLMILKDSGGRSWPVKL--TLTSDQARMKAGWGHFSGHHGIKVGDLCVFHLVDEHTF--NVSIRRA 242
                       56667899********99885..458***************..99999999************************998888..9999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
YFAGGWAEFV RANRLEEENF LVFKYEGNMV FTVKVFETSG CIKNYDDLVV SGALLEQAAP  60
RKRSSTGCGS QPTSKGHGGT HAQKTRKVSD RSLTGDGAIQ AKKQYKPRRI LMEDNDGEQD  120
ATTEKYAQAD THSGIATEAK ESEYTGTLPF YAKTATPCNI RYSYMNIGKK FCVMNGIATN  180
RLMILKDSGG RSWPVKLTLT SDQARMKAGW GHFSGHHGIK VGDLCVFHLV DEHTFNVSIR  240
RAE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-12B3 family protein