PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG014980.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 253aa    MW: 27441.9 Da    PI: 8.7066
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG014980.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding61.22.2e-192872147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      rg++T+eEdel+++++++lG++ W++Ia +++ gRt++++k++w+++
  TRIDC4BG014980.1 28 RGNFTEEEDELIIKLHELLGNK-WSLIAGRLP-GRTDNEIKNYWNTH 72
                      89********************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MVRGAGLLRC GKSCRLRWIN YLRPDLKRGN FTEEEDELII KLHELLGNKW SLIAGRLPGR  60
TDNEIKNYWN THIKRKLLAR GMDPHTHRPL NAIAAAAMPA QQQQQLRAAH ERHFAAATPG  120
GHHLQPQQQD PFAALSNSAE PSCSHSSDDE PAGSATPPPP SRRHLGIDLN LSISLAPYQP  180
DDPAVKQEAA TTGSQNNATT STSAVCMCLN RLGFQGAGEG CRCGGASSVP MQQQASSAQR  240
MFRFIAPLEG GGQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22640.12e-55MYB family protein