PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG015250.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 344aa MW: 37890.5 Da PI: 7.1777

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG015250.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	160.4	7.1e-50	21	148	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 lppGfrFhPtdeelv++yL++k+ g ++ + vi+evd+yk+ePw+Lp+k+++ ++kewyfFs+rd+ky++g+r+nra+ +gyWkatg dk TRIDC4BG015250.1 21 LPPGFRFHPTDEELVMYYLCRKCGGLPIAA-PVIAEVDLYKFEPWRLPEKAAGggpDSKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADK 112 79***********************999.89***********65444455677****************************** PP NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +v s + v +kk Lvfy g+ pkg+kt+W+mheyrl TRIDC4BG015250.1 113 PVGS--PRPVAIKKALVFYAGKPPKGVKTNWIMHEYRL 148 99..779***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
RAQPPVHRTR MDYGFDGALQ LPPGFRFHPT DEELVMYYLC RKCGGLPIAA PVIAEVDLYK 60 FEPWRLPEKA AGGGPDSKEW YFFSPRDRKY PNGSRPNRAA GTGYWKATGA DKPVGSPRPV 120 AIKKALVFYA GKPPKGVKTN WIMHEYRLAD VDRSAAARKK SNNALRLDDW VLCRIYNKKG 180 VIERYDTPDS DVADVKPAPP PAAKIPRQGQ YHAGPAMKVE LSDYGFYQQP SPPATEMLCF 240 DRSGSADRDS NSNHSMPRLH TDSSSSERAL SSPSPDFPSD MDYAESQHAA GLAGGWPGDD 300 WGGVIDDDGF VIDGSLIFDP PSPGAFARDA AAFGDMLTYL QKPF

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

RAQPPVHRTR MDYGFDGALQ LPPGFRFHPT DEELVMYYLC RKCGGLPIAA PVIAEVDLYK  60
FEPWRLPEKA AGGGPDSKEW YFFSPRDRKY PNGSRPNRAA GTGYWKATGA DKPVGSPRPV  120
AIKKALVFYA GKPPKGVKTN WIMHEYRLAD VDRSAAARKK SNNALRLDDW VLCRIYNKKG  180
VIERYDTPDS DVADVKPAPP PAAKIPRQGQ YHAGPAMKVE LSDYGFYQQP SPPATEMLCF  240
DRSGSADRDS NSNHSMPRLH TDSSSSERAL SSPSPDFPSD MDYAESQHAA GLAGGWPGDD  300
WGGVIDDDGF VIDGSLIFDP PSPGAFARDA AAFGDMLTYL QKPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08790.1	2e-93	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG015250.1