PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG015250.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 218aa    MW: 24161.9 Da    PI: 10.2877
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG015250.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1622.3e-50481751128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                       lppGfrFhPtdeelv++yL++k+ g ++ +  vi+evd+yk+ePw+Lp+k+++   ++kewyfFs+rd+ky++g+r+nra+ +gyWkatg dk
  TRIDC4BG015250.2  48 LPPGFRFHPTDEELVMYYLCRKCGGLPIAA-PVIAEVDLYKFEPWRLPEKAAGggpDSKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADK 139
                       79*************************999.89***************65444455677********************************** PP

               NAM  91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +v s   + v +kk Lvfy g+ pkg+kt+W+mheyrl
  TRIDC4BG015250.2 140 PVGS--PRPVAIKKALVFYAGKPPKGVKTNWIMHEYRL 175
                       **99..779***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
PKLEPPPPPI SRTSRRLTDN QSPERALRAQ PPVHRTRMDY GFDGALQLPP GFRFHPTDEE  60
LVMYYLCRKC GGLPIAAPVI AEVDLYKFEP WRLPEKAAGG GPDSKEWYFF SPRDRKYPNG  120
SRPNRAAGTG YWKATGADKP VGSPRPVAIK KALVFYAGKP PKGVKTNWIM HEYRLADVDR  180
SAAARKKSNN ALRVTTLPAC PPPPSPLCQS ALMLGCLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08790.12e-80NAC family protein