PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG015420.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 165aa    MW: 18640.2 Da    PI: 10.0583
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG015420.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.41.7e-1771103133
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkk 33 
                       C++C++ +Tp+WR gp g+ tLCnaCG++y+  
  TRIDC4BG015420.1  71 CTHCRVEDTPQWRTGPAGSGTLCNACGIRYKMG 103
                       *******************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
AVRRRAAYPS WSLALPPELM SAPAYDCHGD SIANDDKDKD YVLSHCKNGR RGNGGPRRAG  60
RQQKKTEGKI CTHCRVEDTP QWRTGPAGSG TLCNACGIRY KMGKLFPEYR PSTSPDFSSL  120
EHSNRHKNVE RIRDRKKKLK VMSPEVPVSP DADDKLLLRV CKYER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60530.11e-26GATA family protein