PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG016240.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 234aa MW: 25306.2 Da PI: 10.6605

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG016240.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.8	2.1e-17	22	67	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ede+l ++v+++G+ +W++Ia+++ gR++k+c++rw++ TRIDC4BG016240.1 22 RGHWRPGEDEKLRQLVEKYGPQNWNSIAEKLE-GRSGKSCRLRWFNQ 67 899***************************.*********996 PP
2	Myb_DNA-binding	62	1.3e-19	75	118	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eE+e+l+ a++ +G++ W++Iar+++ gRt++ +k++w+ + TRIDC4BG016240.1 75 RPFTEEEEERLLAAHRVHGNK-WALIARHFP-GRTDNAVKNHWHVV 118 69*****************.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 234 aa Download sequence
ASSSSTTNTS EGGAKPSSLC PRGHWRPGED EKLRQLVEKY GPQNWNSIAE KLEGRSGKSC 60 RLRWFNQLDP RINKRPFTEE EEERLLAAHR VHGNKWALIA RHFPGRTDNA VKNHWHVVRA 120 RRSRERCRLL AKAASSTFPS YSYSGGAQLD FASASAGSFC FGFSKPSGGG FFGSPPAAAA 180 VAPSSTPVLF NGYGASGNKS LLSRYSSYSG KQPAAPSSLS IAFSSPPSRE ALAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17950.1	5e-58	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG016240.1