PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG017240.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 436aa    MW: 46158.1 Da    PI: 9.3257
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG017240.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.70.00019193215223
                       EETTTTEEESSHHHHHHHHHH.T CS
           zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                       +C+dC++ F   ++L+ H  t H
  TRIDC4BG017240.1 193 PCSDCDEFFVKADSLELHRATrH 215
                       6******************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 436 aa     Download sequence    
MDAPAAGKKM SIGGEKKEQR KSGSSFWRAM ALKSRSQPAG AVESKNSRSE RKKTTTTTKR  60
SVSSIGRSMT CPGSICGTKE SAVLSRESCR NSGRNVSSSS RSLKAPDNDI MSVPVVASGA  120
VVSASSSFNS ETSVATTATT VSSSSSSSSA LSSPLSSIVA GSRSFRKLSG CYYECHSVLD  180
PRTSLVGGAG MLPCSDCDEF FVKADSLELH RATRHAVSEL GAEDTSRNVV EIIFQSSWLV  240
GKPRAAPICR IERILKVHSS GKTVERFEQY RERVKAIAAS STDELARRSF PRCAADGNEI  300
LRFHCTTFTC SLGLAGATSL CRSSPQHCKL CSIIRDGFRV DGDGKIATMA TSGRAHDKTQ  360
TPLSGGSGGG EKRAMLVCRV VAGRVKKLVN SSNSSEESSG DSVSSCSDLD ELSVFNPLAI  420
LPCFVVMYTV ATDIIT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.13e-69C2H2 family protein