PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG017510.10
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 474aa    MW: 52395.2 Da    PI: 4.6649
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG017510.10genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS2131.6e-651034652373
               GRAS   2 velLlecAeavssgdlelaqalLarlsel..aspdg...dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevs 88 
                        ++lLl+ Aeav++gd + a a+ +rl  l   sp+     ++ Rla +f+++L++r+++ +++++  lp         s++++++++ +e+s
  TRIDC4BG017510.10 103 TDLLLTGAEAVEAGDPRFALAVFSRLDGLllGSPENaaaGSFDRLAYHFAQGLRSRISSASTSCS--LPEP-----LPSDRMSVQQIIQELS 187
                        689***********************998885554422379*****************9322222..3222.....3568999********* PP

               GRAS  89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnv 180
                        P+ kf+h+taNqaIl+a++g+++v ++D++i++G+QWp+L+  La    g  s+ +T+v + +   ++  +e ++rL++fA++l++pf+++ 
  TRIDC4BG017510.10 188 PFAKFAHFTANQAILDATKGDTHVNVVDLNIGEGIQWPSLMSDLARH--GGMSFHLTAVTADADYTNDVHHESARRLSEFADSLNLPFQYSS 277
                        *********************************************84..6689********8888*************************** PP

               GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevL.klvkslsPkvvvvveqeadh.nse......sFlerflealeyy 264
                        l  ++ ed  l+e+  +++ +++ ++    +       +l s+ +++L  +vk l+Pk++v+ve+e+ + ++e      sF++ f+eal+++
  TRIDC4BG017510.10 278 LCLHSDED--LHEFFKNSKGSVIFSCDTTSMPY-----KLLSKLPALLpACVKLLQPKLMVIVEEELVRiGKEaslckaSFVDFFFEALHHF 362
                        85554444..47776666778888887744443.....45566778883579*************95443554566666************* PP

               GRAS 265 salfdsleaklpres..eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee 354
                        +++f+sl++ ++  +     + vEre++g++i++ v + g+  +e +       + le+ G  +  ls  +++qa++l+  ++ +g++v +e
  TRIDC4BG017510.10 363 TTVFESLASCFAGGNqgACLRLVEREMVGPRIQDFVGQYGSVTVEVTA-----PQVLERYG--ACDLSGCNVAQARMLVWLFN-RGFEVVHE 446
                        *******988888885667899*******************9666655.....68899877..7899****************.******** PP

               GRAS 355 sgslvlgWkdrpLvsvSaW 373
                        +g lvl+Wk+rpL+svS+W
  TRIDC4BG017510.10 447 KGRLVLCWKSRPLTSVSVW 465
                        ******************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 474 aa     Download sequence    
METMSYPCSP LLSLPTHEES NFFMWSPQVA LHENATIHVD HSTDQQPDNV FLDTAAQDYA  60
NDWHQQDASD VGVFTYCDER ILGQESGNLV AIQEELMEEN SLTDLLLTGA EAVEAGDPRF  120
ALAVFSRLDG LLLGSPENAA AGSFDRLAYH FAQGLRSRIS SASTSCSLPE PLPSDRMSVQ  180
QIIQELSPFA KFAHFTANQA ILDATKGDTH VNVVDLNIGE GIQWPSLMSD LARHGGMSFH  240
LTAVTADADY TNDVHHESAR RLSEFADSLN LPFQYSSLCL HSDEDLHEFF KNSKGSVIFS  300
CDTTSMPYKL LSKLPALLPA CVKLLQPKLM VIVEEELVRI GKEASLCKAS FVDFFFEALH  360
HFTTVFESLA SCFAGGNQGA CLRLVEREMV GPRIQDFVGQ YGSVTVEVTA PQVLERYGAC  420
DLSGCNVAQA RMLVWLFNRG FEVVHEKGRL VLCWKSRPLT SVSVWAPILK ERSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.12e-39GRAS family protein