PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG017510.13
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 475aa    MW: 52523.4 Da    PI: 4.7128
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG017510.13genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS2131.6e-651044662373
               GRAS   2 velLlecAeavssgdlelaqalLarlsel..aspdg...dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevs 88 
                        ++lLl+ Aeav++gd + a a+ +rl  l   sp+     ++ Rla +f+++L++r+++ +++++  lp         s++++++++ +e+s
  TRIDC4BG017510.13 104 TDLLLTGAEAVEAGDPRFALAVFSRLDGLllGSPENaaaGSFDRLAYHFAQGLRSRISSASTSCS--LPEP-----LPSDRMSVQQIIQELS 188
                        689***********************998885554422379*****************9322222..3222.....3568999********* PP

               GRAS  89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnv 180
                        P+ kf+h+taNqaIl+a++g+++v ++D++i++G+QWp+L+  La    g  s+ +T+v + +   ++  +e ++rL++fA++l++pf+++ 
  TRIDC4BG017510.13 189 PFAKFAHFTANQAILDATKGDTHVNVVDLNIGEGIQWPSLMSDLARH--GGMSFHLTAVTADADYTNDVHHESARRLSEFADSLNLPFQYSS 278
                        *********************************************84..6689********8888*************************** PP

               GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevL.klvkslsPkvvvvveqeadh.nse......sFlerflealeyy 264
                        l  ++ ed  l+e+  +++ +++ ++    +       +l s+ +++L  +vk l+Pk++v+ve+e+ + ++e      sF++ f+eal+++
  TRIDC4BG017510.13 279 LCLHSDED--LHEFFKNSKGSVIFSCDTTSMPY-----KLLSKLPALLpACVKLLQPKLMVIVEEELVRiGKEaslckaSFVDFFFEALHHF 363
                        85554444..47776666778888887744443.....45566778883579*************95443554566666************* PP

               GRAS 265 salfdsleaklpres..eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee 354
                        +++f+sl++ ++  +     + vEre++g++i++ v + g+  +e +       + le+ G  +  ls  +++qa++l+  ++ +g++v +e
  TRIDC4BG017510.13 364 TTVFESLASCFAGGNqgACLRLVEREMVGPRIQDFVGQYGSVTVEVTA-----PQVLERYG--ACDLSGCNVAQARMLVWLFN-RGFEVVHE 447
                        *******988888885667899*******************9666655.....68899877..7899****************.******** PP

               GRAS 355 sgslvlgWkdrpLvsvSaW 373
                        +g lvl+Wk+rpL+svS+W
  TRIDC4BG017510.13 448 KGRLVLCWKSRPLTSVSVW 466
                        ******************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 475 aa     Download sequence    
KMETMSYPCS PLLSLPTHEE SNFFMWSPQV ALHENATIHV DHSTDQQPDN VFLDTAAQDY  60
ANDWHQQDAS DVGVFTYCDE RILGQESGNL VAIQEELMEE NSLTDLLLTG AEAVEAGDPR  120
FALAVFSRLD GLLLGSPENA AAGSFDRLAY HFAQGLRSRI SSASTSCSLP EPLPSDRMSV  180
QQIIQELSPF AKFAHFTANQ AILDATKGDT HVNVVDLNIG EGIQWPSLMS DLARHGGMSF  240
HLTAVTADAD YTNDVHHESA RRLSEFADSL NLPFQYSSLC LHSDEDLHEF FKNSKGSVIF  300
SCDTTSMPYK LLSKLPALLP ACVKLLQPKL MVIVEEELVR IGKEASLCKA SFVDFFFEAL  360
HHFTTVFESL ASCFAGGNQG ACLRLVEREM VGPRIQDFVG QYGSVTVEVT APQVLERYGA  420
CDLSGCNVAQ ARMLVWLFNR GFEVVHEKGR LVLCWKSRPL TSVSVWAPIL KERSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.12e-39GRAS family protein