PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG017760.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 852aa MW: 92568.5 Da PI: 7.3902

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG017760.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.2	0.00071	656	694	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLre++P+ a k s + Lek+v+++ Lq TRIDC4BG017760.3 656 RQLIQDRIKELREMVPNgA-----KQCSIDALLEKTVKHMLFLQ 694 67799**********66.....66888899****999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 852 aa Download sequence
RTATAATRHA PPDLRLLKLG PLSSGVLLLL TAFAHSFGRT WPSRFMSLEK GPSAVLPSLA 60 VINGSSMVLR MITGSHPRVA SEMHYQFRAG IKTIAIIPVL PRGVLQLGST GVVMENTSFV 120 MHAKKLCSQL NQRSSMASSA SVKSTSNQSR PLHGASNIQA ADNSFSQFPV IREQYRRSDS 180 ATASSSKSLN ASLFEAAQQN GLTGREHIVY GKPNDMFVQQ ASYCDNRLGS NTQSAEISSG 240 LVPSSLASVE QQQMLMNTIG QLEFGSGTDL ARSALLKSLL YRNPFMHETS DMKLSHGRVG 300 LPQGTAGHGS YGFLPGSAGV VSTTLCTSSQ VSEQGSHSSS GMLRQKQPPV SCNVPQSSEF 360 TMKMVHQERR SSEGALPVSS QSDVQVSNCL NGMSQENLLS RSGHMQKDQN ADRANDPRVA 420 VSTQGVKNMD GCMLPAMPSE TTHSLLLQPT WDNDLFDIFG SEFHQLGHNV DANLVSSCDA 480 KSHSLDREAT EPSICLDSSS LFSSLDNDFP CSGIFSLTDT DQLLDAVISN VNPSSKQSSD 540 DNASCKTALT DIPNISHFGL EELKQCDSSG IPSTVIKNES TQIVKQPYYF DKTEDGCLSQ 600 NNGAQKSQIR LWIENGQNMK CESASASNSK GLDTQSKSNR KRSRPGESSK ARPKDRQLIQ 660 DRIKELREMV PNGAKQCSID ALLEKTVKHM LFLQSVTKHA DKLKDSTESK ILGSENGPVW 720 KDYFEGGATW AFDVGSQSMT CPIIVEDLDR PRQMLVEMIC EDRGIFLEIA DFIKGLGLTI 780 LRGVMEARKS KIWARFTVEA NRDVTRMEIF LSLVRLLEPN CDGSGAAENP NSVNMPLGLV 840 RQPVIPATGG IQ

Sequence ? help Back to Top

Protein Sequence Length: 852 aa Download sequence

RTATAATRHA PPDLRLLKLG PLSSGVLLLL TAFAHSFGRT WPSRFMSLEK GPSAVLPSLA  60
VINGSSMVLR MITGSHPRVA SEMHYQFRAG IKTIAIIPVL PRGVLQLGST GVVMENTSFV  120
MHAKKLCSQL NQRSSMASSA SVKSTSNQSR PLHGASNIQA ADNSFSQFPV IREQYRRSDS  180
ATASSSKSLN ASLFEAAQQN GLTGREHIVY GKPNDMFVQQ ASYCDNRLGS NTQSAEISSG  240
LVPSSLASVE QQQMLMNTIG QLEFGSGTDL ARSALLKSLL YRNPFMHETS DMKLSHGRVG  300
LPQGTAGHGS YGFLPGSAGV VSTTLCTSSQ VSEQGSHSSS GMLRQKQPPV SCNVPQSSEF  360
TMKMVHQERR SSEGALPVSS QSDVQVSNCL NGMSQENLLS RSGHMQKDQN ADRANDPRVA  420
VSTQGVKNMD GCMLPAMPSE TTHSLLLQPT WDNDLFDIFG SEFHQLGHNV DANLVSSCDA  480
KSHSLDREAT EPSICLDSSS LFSSLDNDFP CSGIFSLTDT DQLLDAVISN VNPSSKQSSD  540
DNASCKTALT DIPNISHFGL EELKQCDSSG IPSTVIKNES TQIVKQPYYF DKTEDGCLSQ  600
NNGAQKSQIR LWIENGQNMK CESASASNSK GLDTQSKSNR KRSRPGESSK ARPKDRQLIQ  660
DRIKELREMV PNGAKQCSID ALLEKTVKHM LFLQSVTKHA DKLKDSTESK ILGSENGPVW  720
KDYFEGGATW AFDVGSQSMT CPIIVEDLDR PRQMLVEMIC EDRGIFLEIA DFIKGLGLTI  780
LRGVMEARKS KIWARFTVEA NRDVTRMEIF LSLVRLLEPN CDGSGAAENP NSVNMPLGLV  840
RQPVIPATGG IQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	4e-51	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG017760.3