PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG018120.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 120aa    MW: 13989.8 Da    PI: 7.7528
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG018120.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3887.6e-2837120180
                       EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EE CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfv 80 
                       f+k+ltpsdv+k++rlv+pk++ae++    g + e++  l++ de g+ W+++++y+ +s++yvltkGW+++vk+++L++gD+v
  TRIDC4BG018120.1  37 FEKALTPSDVGKLNRLVIPKQHAERCfplaGDSGEKGLLLSFDDEAGKPWRFRYSYWTSSQSYVLTKGWSRYVKEKHLEAGDVV 120
                       99****************************666668889*******************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    
MAMNPLSQEH PNAWPWGVAM YTNLHYQQYH YEKEHLFEKA LTPSDVGKLN RLVIPKQHAE  60
RCFPLAGDSG EKGLLLSFDD EAGKPWRFRY SYWTSSQSYV LTKGWSRYVK EKHLEAGDVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36080.22e-48B3 family protein