PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG019350.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 599aa    MW: 64290.1 Da    PI: 6.4144
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG019350.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS412.24.9e-1262285922374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn...sseelaalklfsevsPil 91 
                        +lLl+cAe v+s+dl +aq++L ++ ela+p g+++qR+aayf+eA++arl +s+ +ly+ lp  +++  +    s+++aa+++f+ +sP++
  TRIDC4BG019350.3 228 LTLLLQCAESVNSDDLDEAQRALLEIAELATPFGTSTQRVAAYFAEAMSARLISSCLGLYAPLPNASSPAASrlvNSRVAAAFQVFNGISPFV 320
                       579************************************************************77666655568788899999********** PP

              GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
                       kfsh+taNqaI ea+e+e+rvHi+D+di+qGlQWp L++ LasRp+gpp++R+Tg+g+    s e+le+tg+rL++fA++lg+pfef + va 
  TRIDC4BG019350.3 321 KFSHFTANQAIQEAFEREDRVHIVDLDIMQGLQWPGLFHILASRPGGPPRVRLTGLGA----SMEALEATGKRLSDFAHTLGLPFEFYP-VAG 408
                       **********************************************************....***************************.799 PP

              GRAS 185 rledleleeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleakl 275
                       +  +l++e+L v++  +Ea+aV++ +  h+l+d +++ ++    +L+l+++l Pkvv++veq+++h s+sFl+rf+ea++yysalfdsl+a++
  TRIDC4BG019350.3 409 KAGNLDPEKLGVDTrrREAVAVHWLH--HSLYDVTGNDSN----TLNLIQRLAPKVVTMVEQDLSH-SGSFLARFVEAIHYYSALFDSLDASY 494
                       **********999888*********9..999988888888....**********************.899*********************** PP

              GRAS 276 preseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLv 368
                       +++s+er++vE++ll+rei+nv+a  g +r+ + + +++Wre+l ++GF++++l  +aa+qa+lll +++sdgy++ ee+g+l lgWkd  L+
  TRIDC4BG019350.3 495 SEDSSERHVVEQQLLAREIRNVLAVGGPARTGDIK-FGNWREKLAQSGFRAASLAGSAAAQASLLLGMFPSDGYTLVEENGTLKLGWKDLCLL 586
                       *****************************999987.********************************************************* PP

              GRAS 369 svSaWr 374
                       ++SaWr
  TRIDC4BG019350.3 587 TASAWR 592
                       *****8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 599 aa     Download sequence    
MVRKRPAPDV DLPPPRRHVT GDLSDVTAAT GGAAPPQQLP PAVAGSAQLP ALPMQLPAFG  60
SHLQAPVLAM DVVVAPQVAT EVNVNNNSTA WVDGIIRDII GSSGAAVSVA QLIHNVREII  120
HPCNPGLASL LELRLRSLLA SDLVQHQPPP PPPLPPPVPA LPPPPPPDKR RREEEQPNQP  180
PQSPKPPPSA EETAAAAAAA AAAASAALKE RKEEQRRRQR DEEGLHLLTL LLQCAESVNS  240
DDLDEAQRAL LEIAELATPF GTSTQRVAAY FAEAMSARLI SSCLGLYAPL PNASSPAASR  300
LVNSRVAAAF QVFNGISPFV KFSHFTANQA IQEAFEREDR VHIVDLDIMQ GLQWPGLFHI  360
LASRPGGPPR VRLTGLGASM EALEATGKRL SDFAHTLGLP FEFYPVAGKA GNLDPEKLGV  420
DTRRREAVAV HWLHHSLYDV TGNDSNTLNL IQRLAPKVVT MVEQDLSHSG SFLARFVEAI  480
HYYSALFDSL DASYSEDSSE RHVVEQQLLA REIRNVLAVG GPARTGDIKF GNWREKLAQS  540
GFRAASLAGS AAAQASLLLG MFPSDGYTLV EENGTLKLGW KDLCLLTASA WRPVQALGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.10.0GRAS family protein