PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG019350.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 153aa    MW: 16738 Da    PI: 6.2526
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG019350.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS155.93.6e-487146233374
              GRAS 233 slsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFk 325
                       +l Pkvv++veq+++h s+sFl+rf+ea++yysalfdsl+a+++++s+er++vE++ll+rei+nv+a  g +r+ + + +++Wre+l ++GF+
  TRIDC4BG019350.6   7 RLAPKVVTMVEQDLSH-SGSFLARFVEAIHYYSALFDSLDASYSEDSSERHVVEQQLLAREIRNVLAVGGPARTGDIK-FGNWREKLAQSGFR 97 
                       699*************.899****************************************************999987.************** PP

              GRAS 326 pvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                       +++l  +aa+qa+lll +++sdgy++ ee+g+l lgWkd  L+++SaWr
  TRIDC4BG019350.6  98 AASLAGSAAAQASLLLGMFPSDGYTLVEENGTLKLGWKDLCLLTASAWR 146
                       ************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    
MWTTDCRLAP KVVTMVEQDL SHSGSFLARF VEAIHYYSAL FDSLDASYSE DSSERHVVEQ  60
QLLAREIRNV LAVGGPARTG DIKFGNWREK LAQSGFRAAS LAGSAAAQAS LLLGMFPSDG  120
YTLVEENGTL KLGWKDLCLL TASAWRPVQA LGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.15e-68GRAS family protein