PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG019590.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 272aa MW: 29963.4 Da PI: 8.8621

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG019590.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	16.4	1.7e-05	37	85	2	54
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + + erE+ Rd++N+ f eL ++l ++ + Ka++L A + +++L TRIDC4BG019590.1 37 KNHKAEREKLKRDQLNDLFVELSSMLDHD----RQNRGKATVLGDAARVLRDL 85 677899********************997....46677888888888888777 PP

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence
RRLLFYLVIG RMDAGSSTYH IDLQCLDKRA QEKAPKKNHK AEREKLKRDQ LNDLFVELSS 60 MLDHDRQNRG KATVLGDAAR VLRDLTTQVE SLRKEQSTLL TEHQYVGSEK TELQDENTTL 120 RAQVIELQNE LRARIGNSSL NLSSLVVSHP IGSSCTTNLA THPTPHDTWS NVSNLSTMSM 180 VAPTNTPSPL QNQQHHSVAS GQVALRPQEL QLFPGTSASS DRECSRHRSN PATSSLADSL 240 PGQLRLSLPP TSQEESSGGG GAPGNRKERK TS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47640.2	2e-30	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG019590.1