PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG022070.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 633aa    MW: 70800.6 Da    PI: 6.3597
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG022070.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3373.3e-1032566272373
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                        +lLl+cA+a+s+++ + a +lL+r++++++p+gd+ qRla+yf+eAL arla+ +sely++l +++ts   +++ l+a +l+  ++ + k++
  TRIDC4BG022070.7 256 HTLLLNCAQALSTDNRQTAGELLKRIKQHSTPKGDAAQRLAHYFAEALDARLAGRGSELYQSLMARRTS---VADFLKANQLYMAACCCKKVA 345
                       679**************************************************************9999...********************* PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                       ++ aN++I +av g++r+Hi+D+++sqGlQWp Ll+ La+R++gpp+++iTg++ p++g   +  +eetg+rL++fA+ +gvpf+f+  +a +
  TRIDC4BG022070.7 346 FIFANKTICNAVVGKSRLHIVDYGLSQGLQWPGLLRMLAAREGGPPEVKITGIDLPQPGfhGAYHIEETGRRLSNFARVFGVPFKFHG-IAAK 437
                       **********************************************************999999************************.6999 PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
                        e++++e+L+++++E+l+V +  +   l+de++  +   +rd+vL+ ++++ P+v+++   + +++++ Fl+rf eal  ysa fd l+a++p
  TRIDC4BG022070.7 438 RETVQPEDLNIDRDEVLVVISLCHFRLLMDENLGFDTpsPRDQVLNNIRKMLPDVFIHGIMNGSYGATYFLTRFREALFNYSAQFDLLDATVP 530
                       9**********************9999999998655444****************************************************** PP

              GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvs 369
                       r++e r  +Er ++gr++ nv+acega+r+er et+++W+ r ++aG++++pl+ +++  +   ++  + + + v++++ +l+  Wk+r L++
  TRIDC4BG022070.7 531 RDNEGRLLLERDIFGRSALNVIACEGADRVERPETYKQWQLRNHRAGLTQLPLNPDVVRLVLDKVKDNYHKDFVVDDDQRWLLHRWKGRVLYA 623
                       ******************************************************************999888********************* PP

              GRAS 370 vSaW 373
                       +S W
  TRIDC4BG022070.7 624 LSTW 627
                       **** PP
Sequence ? help Back to Top
Protein Sequence    Length: 633 aa     Download sequence    
RAMAATPEEF LGQQSFLSRL EPPSPSLFLG LPPTPRGVED GDSSFDDMAL PYISRLLEED  60
MEDHFFYLYP NHPALLRAQL PFAQILVDVA DSASGSTSAL SPSSSTSTFD ATASTTPSAT  120
SPYDAENYLL PGDQDMLNMA FLKGMEEAKK FLPPNSSLPA MKVDQVVGGA LAGAGLKKKR  180
DTLEPDMGRA SKLMMPEQEE DGARELFDEM MFQEHEICMK GVQQLRIAVD SEPGKNRRKK  240
GRPRRDSSDS EMVDLHTLLL NCAQALSTDN RQTAGELLKR IKQHSTPKGD AAQRLAHYFA  300
EALDARLAGR GSELYQSLMA RRTSVADFLK ANQLYMAACC CKKVAFIFAN KTICNAVVGK  360
SRLHIVDYGL SQGLQWPGLL RMLAAREGGP PEVKITGIDL PQPGFHGAYH IEETGRRLSN  420
FARVFGVPFK FHGIAAKRET VQPEDLNIDR DEVLVVISLC HFRLLMDENL GFDTPSPRDQ  480
VLNNIRKMLP DVFIHGIMNG SYGATYFLTR FREALFNYSA QFDLLDATVP RDNEGRLLLE  540
RDIFGRSALN VIACEGADRV ERPETYKQWQ LRNHRAGLTQ LPLNPDVVRL VLDKVKDNYH  600
KDFVVDDDQR WLLHRWKGRV LYALSTWVAD NAT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-136GRAS family protein