PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG022740.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 265aa MW: 29526.9 Da PI: 6.9487

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG022740.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.8	2.1e-17	38	85	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT +Ed+ l+++++ +G g+W++ ar g++Rt+k+c++rw++yl TRIDC4BG022740.2 38 RGPWTVDEDLTLINYIADHGEGRWNALARAAGLRRTGKSCRLRWLNYL 85 89********************************************97 PP
2	Myb_DNA-binding	55.9	9.9e-18	91	134	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T++E++l++d++ ++G++ W++Ia++++ gRt++++k++w++ TRIDC4BG022740.2 91 RGNFTADEQLLILDLHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 134 89******************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence
WRVLQKILLS TSSMDVVLQS RSSNSMAAEP EEEAELRRGP WTVDEDLTLI NYIADHGEGR 60 WNALARAAGL RRTGKSCRLR WLNYLRPDVK RGNFTADEQL LILDLHSRWG NRWSKIAQHL 120 PGRTDNEIKN YWRTRVQKHA KQLNCDVGSA TFKDAMRYLW MPHLVERIHA AAATAGGDPT 180 MGDTSCASGV TSMAATATTY PDNNSPASAV TTSRSASSGS FTSELCGEEK NLQVHGSGEK 240 TTSGGDWMQD ADQEFWAMHM QIQPD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49620.1	1e-67	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG022740.2