PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG023070.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 377aa    MW: 42053.4 Da    PI: 6.5625
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG023070.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF66.82.2e-211053245
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                      + en+s rqvt+skRr gilKKA+ELS+LCd++  +++fs++g+
  TRIDC4BG023070.5 10 KLENTSGRQVTYSKRRSGILKKAKELSILCDIDLILLMFSPSGR 53
                      679**************************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    
MGRVKLKIKK LENTSGRQVT YSKRRSGILK KAKELSILCD IDLILLMFSP SGRPTICVGD  60
KSPIDEVIAK YAQQTPQERA KRKLESLEAL KKTFKKLDHD VNIQDFLGSG GQTVEELSSH  120
LGALQCQMAD VQKRLSYWSD PEKVENIDHI RAMEQSLKES LNRIGIHKEN FAKQHLMGLQ  180
CPAAQFQNEM QLPLGLTGDP NPSSWFHNGG SSDGQPPMML PEDPSLLQQS YPGYFSMSKQ  240
STDTAAGEQQ HQQAAAVRQH QHQHQQPEFS QGDCLTSLHL GAQFPYQSAF DHASLLNDRL  300
FRPDMELHVD NAAASAMDFV GGHYEMPRPG DEASFQNWAS AACGATMYDH QQQPPSAQLI  360
IQNITESLTV SSLQQQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18750.15e-73M-type_MADS family protein