PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG025460.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 58aa    MW: 6660.87 Da    PI: 5.6797
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG025460.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.61.5e-053332255
                      HHHCTSCCC...TTS-STCHHHHHHHH..HHHHHHH CS
               HLH 22 eLrellPkaskapskKlsKaeiLekAv..eYIksLq 55
                       L++l+P++      K +Ka++L +A+  eY+k+Lq
  TRIDC4BG025460.2  3 ALQSLIPNS-----NKTDKASMLDEAIliEYLKQLQ 33
                      7999***97.....6***********555******9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 58 aa     Download sequence    
MKALQSLIPN SNKTDKASML DEAILIEYLK QLQLQVQVSK CMSQWLVDVE TNLLVHLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.16e-12bHLH family protein