PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG026790.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YC
Protein Properties Length: 176aa    MW: 20053.9 Da    PI: 10.7227
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG026790.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC64.61.8e-20441231998
             NF-YC  19 helPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98 
                       +++P arikki++adedv +i+  +Pvl+s+a elf+ +l  rs+  + ++  +tl+   ++++v+r   fdfl++iv +
  TRIDC4BG026790.2  44 TRFPAARIKKIMQADEDVGKIALAVPVLVSRALELFLQDLIDRSYKITLQSGAKTLNSFHLKQCVKRYSSFDFLTEIVNK 123
                       689*************************************************************************9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
TTKQETQSSR RTRKENTQKV DYDCRHRARR GVGVATKMRK KLGTRFPAAR IKKIMQADED  60
VGKIALAVPV LVSRALELFL QDLIDRSYKI TLQSGAKTLN SFHLKQCVKR YSSFDFLTEI  120
VNKVPDLGGG ESCGDERGLP RRRKFSNGSD PENEEPRSSK MVQFHHISAE LNFLSR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1140144PRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12480.14e-51NF-YC family protein