PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG026900.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GeBP
Protein Properties Length: 334aa    MW: 36812.2 Da    PI: 5.5233
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG026900.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF5731086.7e-3453152297
            DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkife 90 
                       lfqrlw+eeDeiv+L+++ +f+a++g+   +++ d++ fye +++++++++sksql eK+rrLK+K++++v++ + sg+ +sf+++h+q +fe
  TRIDC4BG026900.2  53 LFQRLWTEEDEIVILRAFAEFTAQRGTafASHQyDTEPFYEEMRRRLQLDFSKSQLAEKLRRLKRKYRNCVERlRCSGNTFSFRSPHEQAVFE 145
                       79*************************9977778***************************************8889**************** PP

            DUF573  91 lskkiWg 97 
                       +++ iW+
  TRIDC4BG026900.2 146 IARNIWR 152
                       ******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
AASSSFPDAD AYGNGDSEDI DFPVDPIPNP PFSSAPVAAP ASATATVGER RPLFQRLWTE  60
EDEIVILRAF AEFTAQRGTA FASHQYDTEP FYEEMRRRLQ LDFSKSQLAE KLRRLKRKYR  120
NCVERLRCSG NTFSFRSPHE QAVFEIARNI WRPSSDKHGR DPNAADSEDD ATITATNAAA  180
NGDAKSPSSS KAHRRGRRRR TADLAADASE APQPYTSGPM PVKTEDSLPA FFPHVSMDGA  240
EPVVAPVVNT ESSVLTPLFK EMVRAMLGIG GCPSPLGLGA KVPEQPSAIL GIPMEGEKWR  300
QQRILELEVY LRRIDLLQDE VKSALEELKS TPPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.16e-42GeBP family protein